Info • Rhizoctonia solani AG-1 IB

Status

This genome was sequenced by Daniel Wibberg et al. in Institute for Genome Research and Systems Biology, CeBiTec, Bielefeld University, D-33501 Bielefeld, Germany (Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14).

Summary statistics for the Rhizoctonia solani AG-1 IB v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 47.66
Sequencing read coverage depth 25x
# of contigs 3979
# of scaffolds 1600
# of scaffolds >= 2Kbp 1600
Scaffold N50 133
Scaffold L50 (Mbp) 0.08
# of gaps 2379
% of scaffold length in gaps 3.5%
Three largest Scaffolds (Mbp) 1.08, 0.66, 0.64


Gene Models ExternalModels
length (bp) of: average median
gene 1680 1368
transcript 1327 1080
exon 227 130
intron 75 56
description:
protein length (aa) 442 360
exons per gene 5.83 5
# of gene models 15157


Genome Reference(s)

Funding

This project was not sequenced at the JGI.