Info • Rhizoctonia solani AG-8 WAC10335

Status

The genome sequence and gene models of Rhizoctonia solani AG-8 WAC10335 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Rhizoctonia solani AG-8 WAC10335 are below.
Genome Assembly
Genome Assembly size (Mbp) 39.82
Sequencing read coverage depth 1000x
# of contigs 5795
# of scaffolds 857
# of scaffolds >= 2Kbp 632
Scaffold N50 65
Scaffold L50 (Mbp) 0.16
# of gaps 4938
% of scaffold length in gaps 13.0%
Three largest Scaffolds (Mbp) 1.19, 0.87, 0.86


Gene Models ExternalModels
length (bp) of: average median
gene 1237 958
transcript 970 735
exon 192 125
intron 68 56
description:
protein length (aa) 323 245
exons per gene 5.05 4
# of gene models 13951


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Hane JK, Anderson JP, Williams AH, Sperschneider J, Singh KB
Genome sequencing and comparative genomics of the broad host-range pathogen Rhizoctonia solani AG8.
PLoS Genet. 2014 May;10(5):e1004281. doi: 10.1371/journal.pgen.1004281

Funding

This project was not sequenced at the JGI.