Info • Schizosaccharomyces japonicus yFS275

Status

This genome was sequenced by the Broad Institute. Please check their data use policies.

Summary statistics for the Schizosaccharomyces japonicus yFS275 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 11.73
Sequencing read coverage depth 9x
# of contigs 87
# of scaffolds 32
# of scaffolds >= 2Kbp 32
Scaffold N50 2
Scaffold L50 (Mbp) 3.87
# of gaps 55
% of scaffold length in gaps 5.1%
Three largest Scaffolds (Mbp) 4.29, 3.87, 3.04


Gene Models BroadModels
length (bp) of: average median
gene 2061 1785
transcript 1976 1691
exon 939 464
intron 79 58
description:
protein length (aa) 468 382
exons per gene 2.10 2
# of gene models 4878


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Rhind N, Chen Z, Yassour M, Thompson DA, Haas BJ, Habib N, Wapinski I, Roy S, Lin MF, Heiman DI, Young SK, Furuya K, Guo Y, Pidoux A, Chen HM, Robbertse B, Goldberg JM, Aoki K, Bayne EH, Berlin AM, Desjardins CA, Dobbs E, Dukaj L, Fan L, FitzGerald MG, French C, Gujja S, Hansen K, Keifenheim D, Levin JZ, Mosher RA, Müller CA, Pfiffner J, Priest M, Russ C, Smialowska A, Swoboda P, Sykes SM, Vaughn M, Vengrova S, Yoder R, Zeng Q, Allshire R, Baulcombe D, Birren BW, Brown W, Ekwall K, Kellis M, Leatherwood J, Levin H, Margalit H, Martienssen R, Nieduszynski CA, Spatafora JW, Friedman N, Dalgaard JZ, Baumann P, Niki H, Regev A, Nusbaum C
Comparative functional genomics of the fission yeasts.
Science. 2011 May 20;332(6032):930-6. doi: 10.1126/science.1203357

Funding

This project was not sequenced at the JGI.