Status
This genome was sequenced by the Broad Institute. Please check their data use policies.
Summary statistics for the Spizellomyces punctatus DAOM
BR117 v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 24.13 |
| Sequencing read coverage depth | 11.7x (ABI) |
| # of contigs | 329 |
| # of scaffolds | 38 |
| # of scaffolds >= 2Kbp | 38 |
| Scaffold N50 | 7 |
| Scaffold L50 (Mbp) | 1.47 |
| # of gaps | 291 |
| % of scaffold length in gaps | 0.9% |
| Three largest Scaffolds (Mbp) | 2.24, 2.17, 1.90 |
| Gene Models | BroadModels | |
| length (bp) of: | average | median |
| gene | 2228 | 1850 |
| transcript | 1872 | 1542 |
| exon | 311 | 170 |
| intron | 73 | 67 |
| description: | ||
| protein length (aa) | 520 | 406 |
| exons per gene | 6.02 | 5 |
| # of gene models | 9424 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Russ C, Lang BF, Chen Z, Gujja S, Shea T, Zeng Q, Young S, Cuomo CA, Nusbaum C
Genome Sequence of Spizellomyces punctatus.
Genome Announc. 2016 Aug 18;4(4):. doi: 10.1128/genomeA.00849-16
Russ C, Lang BF, Chen Z, Gujja S, Shea T, Zeng Q, Young S, Cuomo CA, Nusbaum C
Genome Sequence of Spizellomyces punctatus.
Genome Announc. 2016 Aug 18;4(4):. doi: 10.1128/genomeA.00849-16
Funding
This project was not sequenced at the JGI.
