Info • Tetraselmis striata


The Tetraselmis striata genome sequence and gene models have not been determined by the JGI, but were downloaded from the Los Alamos National Laboratory (LANL) Greenhouse portal on October 31, 2019. Please note that this copy of the genome is not maintained by LANL and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to automatically annotate predicted proteins.

Summary statistics for the Tetraselmis striata release are below.
Genome Assembly
Genome Assembly size (Mbp) 232.09
Sequencing read coverage depth
# of contigs 3602
# of scaffolds 3602
# of scaffolds >= 2Kbp 3512
Scaffold N50 516
Scaffold L50 (Mbp) 0.13
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 4.14, 0.73, 0.68

Gene Models ExternalModels
length (bp) of: average median
gene 2650 1614
transcript 1263 915
exon 260 152
intron 362 191
protein length (aa) 421 305
exons per gene 4.85 3
# of gene models 46696

Genome Reference(s)


This project was not sequenced at the JGI.