BLAST function on our site is limited to a single organism due to maintenance activity on our computational cluster.
Info • Tetrahymena thermophila SB210

Status

The genome sequence and gene models of Tetrahymena thermophila were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on May 31, 2018. In order to allow comparative analyses with other genomes sequenced by the JGI, a copy of this genome is incorporated into the JGI Genome Portal. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Tetrahymena thermophila SB210 release are below.
Genome Assembly
Genome Assembly size (Mbp) 103.01
Sequencing read coverage depth
# of contigs 1778
# of scaffolds 1158
# of scaffolds >= 2Kbp 610
Scaffold N50 59
Scaffold L50 (Mbp) 0.52
# of gaps 620
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 2.22, 2.17, 1.87


Gene Models ExternalModels
length (bp) of: average median
gene 2401 1734
transcript 1909 1357
exon 425 203
intron 143 74
description:
protein length (aa) 628 443
exons per gene 4.49 3
# of gene models 26994


Genome Reference(s)

Funding

This project was not sequenced at the JGI.