Info • Trichomonas vaginalis G3


The genome sequence and gene models of Trichomonas vaginalis were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on May 29, 2018. In order to allow comparative analyses with other genomes sequenced by the JGI, a copy of this genome is incorporated into the JGI Genome Portal. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Trichomonas vaginalis G3 release are below.
Genome Assembly
Genome Assembly size (Mbp) 176.42
Sequencing read coverage depth
# of contigs 72950
# of scaffolds 64769
# of scaffolds >= 2Kbp 5258
Scaffold N50 1020
Scaffold L50 (Mbp) 0.03
# of gaps 8181
% of scaffold length in gaps 0.5%
Three largest Scaffolds (Mbp) 0.58, 0.50, 0.50

Gene Models ExternalModels
length (bp) of: average median
gene 931 657
transcript 931 657
exon 930 657
intron 198 74
protein length (aa) 307 212
exons per gene 1.00 1
# of gene models 59679

Genome Reference(s)


This project was not sequenced at the JGI.