Info • Valsa mali str. 03-8

Status

The genome sequence and gene models of Valsa mali str. 03-8 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 44.73
Sequencing read coverage depth
# of contigs 829
# of scaffolds 353
# of scaffolds >= 2Kbp 353
Scaffold N50 6
Scaffold L50 (Mbp) 3.35
# of gaps 476
% of scaffold length in gaps 6.2%
Three largest Scaffolds (Mbp) 5.40, 4.90, 3.83


Gene Models ExternalModels
length (bp) of: average median
gene 2054 1768
transcript 1857 1572
exon 699 424
intron 121 76
description:
protein length (aa) 495 417
exons per gene 2.66 2
# of gene models 11165


Genome Reference(s)

Funding

This project was not sequenced at the JGI.