Info • Chara braunii S276


The Chara braunii S276 genome sequence and gene models have not been determined by the JGI, but were downloaded from ORCAE on September 23, 2019. Please note that this copy of the genome is not maintained by ORCAE and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Chara braunii S276 release are below.
Genome Assembly
Genome Assembly size (Mbp) 1750.99
Sequencing read coverage depth
# of contigs 195435
# of scaffolds 11427
# of scaffolds >= 2Kbp 5979
Scaffold N50 234
Scaffold L50 (Mbp) 2.26
# of gaps 184008
% of scaffold length in gaps 18.3%
Three largest Scaffolds (Mbp) 14.23, 10.86, 10.46

Gene Models ExternalModels
length (bp) of: average median
gene 16622 4283
transcript 2598 2110
exon 720 457
intron 5374 2061
protein length (aa) 659 500
exons per gene 3.61 2
# of gene models 35672

Genome Reference(s)


This project was not sequenced at the JGI.