Image Credit: Kathryn Bushley
Within the framework of JGI "Community Sequencing Project: Defensive Mutualism of Fungal Root Endophytes of Soybean" CSP project, we are investigating the potential role of fungal endophytes isolated from soybean roots in protecting the plant from two devastating root plant pathogens: 1) the root rot fungus causing Soybean Sudden Death Syndrome (Fusarium virguliforme) and 2) the soybean cyst nematode (Heterodera glycines). These fungi were screened for either anti-fungal or anti-nematode activity in-vitro and genome, transcriptome, and metabolome sequencing will address possible mechanisms of antagonism against these pathogens.
Epicoccum nigrum is a common saprophytic fungus that belongs to the class Dothideomycetes. It is widespread in the environment and can be found on decaying plant material, soil, and sometimes on living plants. Epicoccum nigrum is known for producing dark-colored, round to elliptical spores called conidia.
