The genome sequence and gene models of Scenedesmus obliquus UTEX 393 (Tetradesmus obliquus) were not determined by the Joint Genome Institute (JGI), but were downloaded from EBI, on November 18, 2019. In order to ensure this genome is comparable to those sequenced by the JGI, we applied filters to remove if present: 1) transposable elements, 2) pseudogenes, 3) alternative transcripts and overlapping models, 4) alleles on secondary scaffolds, and 5) unsupported short models. This resulted in removal of 2,944 models from S. obliquus and generation of the FilteredModels1 gene track. All published models are available in the ExternalModels track. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by EBI and is therefore not automatically updated.
Genome Reference(s)
Carreres B. M., de Jaeger L., Springer J., Barbosa M. J., Breuer G., van den End E. J., Kleinegris D. M. M., Schäffers I., Wolbert E. J. H., Zhang H., Lamers P. P., Draaisma R. B., Martins dos Santos V. A. P., Wijffels R. H., Eggink G., Schaap P. J., Martens D. E.
Draft Genome Sequence of the Oleaginous Green Alga <i>Tetradesmus obliquus</i> UTEX 393
Genome Announc. 2017;5(3): doi: 10.1128/genomeA.01449-16
Carreres Benoit M., León-Saiki G. Mitsue, Schaap Peter J., Remmers Ilse M., van der Veen Douwe, Martins dos Santos Vitor A.P., Wijffels René H., Martens Dirk E., Suarez-Diez Maria
The diurnal transcriptional landscape of the microalga Tetradesmus obliquus
Algal Research. 2019;40:101477. doi: 10.1016/j.algal.2019.101477