Phycocosm Portals

150	Name	Assembly Length	# of Genes	Publication
1	Enallax costatus CCAP 276/31 v1.1	127,564,975	19,308
2	Tetradesmus deserticola SNI-2 v1.1	198,160,740	17,197
3	Flechtneria rotunda SEV3VF49 v1.1	76,784,650	16,599
4	Tetradesmus obliquus UTEX 72 v1.1	107,156,682	16,985
5	Hyphochytrium catenoides ATCC 18719	68,540,538	18,481	Leonard G et al., 2018
6	Spirogloea muscicola CCAC 0214	171,136,975	27,137	Cheng S et al., 2019
7	Desmodesmus armatus UTEX B 2533 v2.0	122,633,162	15,634
8	Chromera velia CCMP2878	193,889,730	24,133	Woo YH et al., 2015
9	Labyrinthula sp. SR_Ha_C	50,948,119	8,488	Tan MH et al., 2021
10	Hondaea fermentalgiana CCAP_4062/3	38,943,350	11,853	Seddiki K et al., 2018
11	Nitzschia inconspicua GAI-293 v2.0	99,706,970	17,968	Oliver A et al., 2021
12	Tribonema minus UTEX B 3156 v1.0	158,345,074		Mahan KM et al., 2021
13	Hyaloperonospora arabidopsidis Emoy2 v2.0	78,897,814	9,138	Baxter L et al., 2010
14	Scenedesmus obliquus var. DOE0013 v1.0	102,771,905	15,938
15	Scenedesmus obliquus var. UTEX 1450 v1.0	104,043,312	16,565
16	Scenedesmus obliquus var. UTEX2630 v1.0	106,020,692	16,604
17	Cladocopium goreaui SCF055-01	1,027,792,016	35,913	Liu H et al., N/D
18	Breviolum minutum	609,476,485	47,014	Shoguchi E et al., 2013
19	Fugacium kawagutii CCMP2468	1,048,482,934	26,609	Lin S et al., 2015
20	Seminavis robusta D6	125,572,603	37,455	Osuna-Cruz CM et al., 2020
21	Chrysochromulina parva Lackey	65,764,750	28,185
22	Amoebophrya ceratii AT5.2	87,690,817	19,925	John U et al., 2019
23	Nemacystus decipiens Onna-1	153,973,811	17,099	Nishitsuji K et al., 2019
24	Nannochloropsis salina CCMP1776	27,757,252	8,927	Ohan JA et al., 2019
25	Fistulifera solaris JPCC DA0580	49,736,633	20,413	Tanaka T et al., 2015
26	Cyclotella cryptica CCMP322	161,759,242	21,121	Traller JC et al., N/D
27	Undaria pinnatifida M23	511,280,173	14,300	Shan T et al., N/D
28	Pyropia yezoensis U-51	43,483,963	10,327	Nakamura Y et al., N/D
29	Gracilariopsis chorda isolate SKKU-2015	92,180,038	10,806	Lee J et al., 2018
30	Chlamydomonas incerta SAG 7.73	129,236,421	16,957	Craig RJ et al., 2021
31	Chlamydomonas schloesseri CCAP 11/173	130,201,002	16,268	Craig RJ et al., 2021
32	Picocystis sp. ML	29,463,432	5,613	Junkins EN et al., 2019
33	Edaphochlamys debaryana CCAP 11/70	142,143,002	20,450	Craig RJ et al., 2021
34	Cladosiphon okamuranus S strain	169,730,755	14,750	Nishitsuji K et al., 2016
35	Galdieria sulphuraria Azora	14,055,766	6,305	Rossoni AW et al., 2019
36	Galdieria sulphuraria MtSh	14,998,623	6,160	Rossoni AW et al., 2019
37	Galdieria sulphuraria SAG 21.92	14,317,600	5,956	Rossoni AW et al., 2019
38	Galdieria sulphuraria MS1	14,906,717	7,441	Rossoni AW et al., 2019
39	Galdieria sulphuraria YNP5578.1	14,439,647	6,118	Rossoni AW et al., 2019
40	Galdieria sulphuraria 5572	14,288,869	6,472	Rossoni AW et al., 2019
41	Galdieria sulphuraria 002	14,106,382	5,912	Rossoni AW et al., 2019
42	Cyanidioschyzon merolae Soos	12,336,830	4,406	Rossoni AW et al., 2019
43	Galdieria sulphuraria RT22	15,626,563	6,982	Rossoni AW et al., 2019
44	Galdieria phelgrea Soos	14,871,243	6,125	Rossoni AW et al., 2019
45	Chlorella sorokiniana str. 1228	61,391,260	12,169
46	Chlorella sorokiniana UTEX 1602	59,371,605	10,384	Arriola MB et al., 2018
47	Botryococcus braunii Showa v2.1	170,200,492	23,685	Browne DR et al., 2017
48	Trebouxia sp. A1-2	52,896,788	13,918	Greshake Tzovaras B et al., 2020
49	Picochlorum renovo	14,391,424	9,010	Dahlin LR et al., N/D
50	Chlorella sp. A99	40,934,037	8,298	Hamada M et al., 2018
51	Auxenochlorella protothecoides UTEX 25	21,217,637	6,041
52	Chlorella sorokiniana DOE1412	57,881,618	12,611
53	Tetrabaena socialis NIES-571	135,779,852	14,296	Featherston J et al., 2018
54	Chlamydomonas eustigma NIES-2499	66,605,202	14,061	Hirooka S et al., 2017
55	Chlorella sorokiniana UTEX 1230	58,534,920	12,871
56	Picochlorum soloecismus DOE101	15,252,578	6,861	Gonzalez-Esquer CR et al., 2018
57	Mesostigma viride NIES-296	441,698,809	29,795	Liang Z et al., 2020
58	Cyanophora paradoxa CCMP329	98,351,904	25,518	Price DC et al., 2019
59	Mesostigma viride CCAC 1140	281,412,241	9,300	Wang S et al., 2020
60	Chlorokybus atmophyticus CCAC 0220	74,335,726	9,300	Wang S et al., 2020
61	Prasinoderma coloniale CCMP1413	25,323,194	7,139	Li L et al., 2020
62	Mesotaenium endlicherianum SAG 12.97	173,768,482	11,080	Cheng S et al., 2019
63	Tetraselmis striata	232,085,675	46,696	Steadman Tyler CR et al., 2019
64	Chara braunii S276	1,750,992,823	35,672	Nishiyama T et al., 2018
65	Ulva mutabilis Føyn	98,484,689	12,920	De Clerck O et al., 2018
66	Micractinium conductrix SAG 241.80	60,773,875	10,070	Arriola MB et al., 2018
67	Vitrella brassicaformis CCMP3155	72,700,666	21,239	Woo YH et al., 2015
68	Ochromonas sp. CCMP1393 v1.4	56,491,843	19,714
69	Paraphysomonas imperforata CCMP1604 v1.4	67,191,102	17,134
70	Minidiscus variabilis CCMP495 v1.0	76,188,022	25,179
71	Scenedesmus sp. NREL 46B-D3 v1.0	151,896,789	17,399	Calhoun S et al., 2021
72	Scenedesmus obliquus UTEX B 3031	210,263,644	22,378	Starkenburg SR et al., 2017
73	Chloropicon primus CCMP1205	17,400,691	8,327	Lemieux C et al., 2019
74	Caulerpa lentillifera	28,654,260	8,818	Arimoto A et al., 2019
75	Volvox carteri v2.1	131,163,211	13,076	Prochnik SE et al., 2010
76	Chlamydomonas reinhardtii v5.6	111,100,715	16,403	Merchant SS et al., 2007
77	Scenedesmus obliquus UTEX 393	107,715,903	16,779	Carreres BM et al., 2017
78	Scenedesmus obliquus EN0004 v1.0	100,077,845	15,053
79	Raphidocelis subcapitata NIES-35	51,162,697	13,383	Suzuki S et al., 2018
80	Reticulomyxa filosa	101,867,045	39,963	Glöckner G et al., 2014
81	Toxoplasma gondii ME49	65,668,120	8,318	Kissinger JC et al., 2003
82	Oxytricha trifallax JRB310	67,158,112	24,578	Swart EC et al., N/D
83	Tetrahymena thermophila SB210	103,014,375	26,994	Eisen JA et al., 2006
84	Plasmodium falciparum 3D7	23,326,872	5,392	Gardner MJ et al., 2002
85	Paramecium tetraurelia d4_2	72,094,543	39,580	Aury JM et al., 2006
86	Trichomonas vaginalis G3	176,420,065	59,679	Carlton JM et al., 2007
87	Trypanosoma brucei brucei TREU927	26,075,494	8,787	Berriman M et al., 2005
88	Giardia intestinalis ATCC 50803	11,213,615	6,502	Morrison HG et al., 2007
89	Phaeocystis globosa Pg-G v2.3	155,849,266	30,220
90	Phaeocystis antarctica CCMP1374 v2.2	198,936,094	37,754
91	Chromochloris zofingiensis SAG 211-14 v5.0	60,130,699	15,274	Roth MS et al., 2017
92	Chondrus crispus Stackhouse	104,980,420	9,808	Collén J et al., 2013
93	Cyanidioschyzon merolae strain 10D	16,546,747	4,803	Nozaki H et al., 2007
94	Galdieria sulphuraria 074W	13,712,004	7,174	Schönknecht G et al., 2013
95	Symbiodinium microadriaticum CCMP2467	808,226,712	43,403	Aranda M et al., 2016
96	Chrysochromulina tobin CCMP291	59,073,094	16,770	Hovde BT et al., N/D
97	Nannochloropsis oceanica CCMP1779 v2.0	36,454,932	10,641
98	Symbiochloris reticulata Africa extracted metagenome v1.0	58,569,719	12,720
99	Symbiochloris reticulata Scotland extracted metagenome v1.0	59,360,525	12,315
100	Symbiochloris reticulata Switzerland extracted metagenome v1.0	59,348,134	12,701
101	Symbiochloris reticulata Spain extracted metagenome v1.0	56,841,181	12,144
102	Porphyra umbilicalis isolate 4086291	87,888,981	13,567	Brawley SH et al., 2017
103	Nannochloropsis gaditana B-31	27,589,342	10,929	Corteggiani Carpinelli E et al., 2014
104	Blastocystis hominis Singapore isolate B (sub-type 7)	18,817,245	6,020	Denoeud F et al., N/D
105	Saprolegnia parasitica CBS 223.65	53,093,248	20,113	Jiang RH et al., 2013
106	Phytophthora infestans T30-4	228,543,505	17,797	Haas BJ et al., 2009
107	Thalassiosira oceanica CCMP1005	92,185,637	34,642	Lommer M et al., 2012
108	Ectocarpus siliculosus Ec 32	195,810,619	16,271	Cock JM et al., 2010
109	Auxenochlorella protothecoides 0710	22,924,637	7,013	Gao C et al., 2014
110	Sorghum bicolor	738,540,932	35,899	Paterson AH et al., 2009
111	Ostreococcus tauri RCC1115 v1.0	14,904,543	8,218	Blanc-Mathieu R et al., 2017
112	Ostreococcus tauri RCC4221 v3.0	12,916,858	7,669	Blanc-Mathieu R et al., 2014
113	Cryptophyceae sp. CCMP2293 v1.0	534,466,773	33,051
114	Pavlovales sp. CCMP2436 v1.0	165,407,586	26,034
115	Pelagophyceae sp. CCMP2097 v1.0	85,824,453	19,402
116	Ochromonadaceae sp. CCMP2298 v1.0	61,140,752	20,195
117	Symbiochloris reticulata Spain reference genome v1.0	58,316,282	12,582
118	Micromonas commoda NOUM17 (RCC 299)	20,989,326	10,262	Worden AZ et al., 2009
119	Micromonas pusilla CCMP1545	21,945,545	9,829	Worden AZ et al., 2009
120	Asterochloris glomerata Cgr/DA1pho v2.0	55,816,160	10,025	Armaleo D et al., 2019
121	Emiliania huxleyi CCMP1516 v1.0	167,727,055	33,341	Read BA et al., 2013
122	Phytophthora sojae v3.0	82,601,618	26,584	Tyler BM et al., 2006
123	Phytophthora ramorum v1.1	66,652,401	15,743	Tyler BM et al., 2006
124	Aureococcus anophagefferens clone 1984	56,660,578	11,501	Gobler CJ et al., 2011
125	Naegleria gruberi v1.0	40,964,085	15,763	Fritz-Laylin LK et al., 2010
126	Chlorella variabilis NC64A	46,159,515	9,791	Blanc G et al., 2010
127	Selaginella moellendorffii v1.0		22,285	Banks JA et al., 2011
128	Ostreococcus lucimarinus	13,204,888		Palenik B et al., 2007
129	Ostreococcus sp. RCC809	13,296,292	3,174
130	Physcomitrella patens subsp patens v1.1	479,985,347	35,938	Rensing SA et al., 2008
131	Arabidopsis lyrata	206,667,935		Hu TT et al., 2011
132	Schizochytrium aggregatum ATCC 28209	40,854,260	10,612
133	Aplanochytrium kerguelense PBS07 v1.0	35,774,161	11,892
134	Aurantiochytrium limacinum ATCC MYA-1381	60,926,267	14,859
135	Phytophthora cinnamomi var cinnamomi v1.0	77,967,402	26,131
136	Pseudo-nitzschia multiseries CLN-47	218,730,801	19,703
137	Bigelowiella natans CCMP2755	94,701,163	21,708	Curtis BA et al., 2012
138	Guillardia theta CCMP2712	87,159,915	24,840	Curtis BA et al., 2012
139	Phytophthora capsici LT1534 v11.0	64,023,748	19,805	Lamour KH et al., 2012
140	Coccomyxa subellipsoidea C-169	48,952,548	9,851	Blanc G et al., 2012
141	Fragilariopsis cylindrus CCMP 1102	80,540,407	21,066	Mock T et al., 2017
142	Phaeodactylum tricornutum CCAP 1055/1 v2.0	26,138,756	10,025	Bowler C et al., 2008
143	Thalassiosira pseudonana CCMP 1335	31,301,782	11,390	Armbrust EV et al., 2004
144	Saccharina japonica str. Ja	548,536,073	18,732	Ye N et al., 2015
145	Klebsormidium nitens NIES-2285	103,921,766	16,132	Hori K et al., 2014
146	Monoraphidium neglectum SAG 48.87	69,711,829	16,755	Bogen C et al., 2013
147	Bathycoccus prasinos RCC1105	15,074,320	7,900	Moreau H et al., 2012
148	Gonium pectorale NIES-2863	148,806,073	16,290	Hanschen ER et al., 2016
149	Dunaliella salina CCAP19/18	343,704,392	18,801	Polle JEW et al., 2017
150	Populus trichocarpa v1.1	485,510,911	45,555	Tuskan GA et al., 2006