159NameAssembly Length# of GenesPublication
1Microglena sp. YARC572,689,86519,590Ye N et al., 2022
2Micromonas sp. AD1 metagenome extracted assembly21,112,59311,269Duncan A et al., 2022
3Mesotaenium kramstae Lemmermann NIES-657 v3.0331,691,28115,982
4Scenedesmus obliquus UTEX 393 v2.0107,859,68019,017
5Cafeteria roenbergensis BVI36,283,8878,555Hackl T et al., 2020
6Chlamydomonas priscuii UWO241211,641,45614,754Stahl-Rommel S et al., 2022
7Monoraphidium minutum 26B-AM v1.068,170,63015,337Calhoun Sara et al., 2022
8Enallax costatus CCAP 276/31 v1.1127,564,97519,308
9Tetradesmus deserticola SNI-2 v1.1198,160,74017,197
10Flechtneria rotunda SEV3VF49 v1.176,784,65016,599
11Tetradesmus obliquus UTEX 72 v1.1107,156,68216,985
12Hyphochytrium catenoides ATCC 1871968,540,53818,481Leonard G et al., 2018
13Spirogloea muscicola CCAC 0214171,136,97527,137Cheng S et al., 2019
14Desmodesmus armatus UTEX B 2533 v2.0122,633,16215,634
15Chromera velia CCMP2878193,889,73024,133Woo YH et al., 2015
16Labyrinthula sp. SR_Ha_C50,948,1198,488Tan MH et al., 2021
17Hondaea fermentalgiana CCAP_4062/338,943,35011,853Seddiki K et al., 2018
18Nitzschia inconspicua GAI-293 v2.099,706,97017,968Oliver A et al., 2021
19Tribonema minus UTEX B 3156 v1.0158,345,07418,290Mahan KM et al., 2021
20Hyaloperonospora arabidopsidis Emoy2 v2.078,897,8149,138Baxter L et al., 2010
21Scenedesmus obliquus var. DOE0013 v1.0102,771,90515,938
22Scenedesmus obliquus var. UTEX 1450 v1.0104,043,31216,565
23Scenedesmus obliquus var. UTEX2630 v1.0106,020,69216,604
24Cladocopium goreaui SCF055-011,027,792,01635,913Liu H et al., 2018
25Breviolum minutum609,476,48547,014Shoguchi E et al., 2013
26Fugacium kawagutii CCMP24681,048,482,93426,609Lin S et al., 2015
27Seminavis robusta D6125,572,60337,455Osuna-Cruz CM et al., 2020
28Chrysochromulina parva Lackey65,764,75028,185
29Amoebophrya ceratii AT5.287,690,81719,925John U et al., 2019
30Nemacystus decipiens Onna-1153,973,81117,099Nishitsuji K et al., 2019
31Nannochloropsis salina CCMP177627,757,2528,927Ohan JA et al., 2019
32Fistulifera solaris JPCC DA058049,736,63320,413Tanaka T et al., 2015
33Cyclotella cryptica CCMP322161,759,24221,121Traller JC et al., 2016
34Undaria pinnatifida M23511,280,17314,300Shan T et al., 2020
35Pyropia yezoensis U-5143,483,96310,327Nakamura Y et al., 2013
36Gracilariopsis chorda isolate SKKU-201592,180,03810,806Lee J et al., 2018
37Chlamydomonas incerta SAG 7.73129,236,42116,957Craig RJ et al., 2021
38Chlamydomonas schloesseri CCAP 11/173130,201,00216,268Craig RJ et al., 2021
39Picocystis sp. ML29,463,4325,613Junkins EN et al., 2019
40Edaphochlamys debaryana CCAP 11/70142,143,00220,450Craig RJ et al., 2021
41Cladosiphon okamuranus S strain169,730,75514,750Nishitsuji K et al., 2016
42Galdieria sulphuraria Azora14,055,7666,305Rossoni AW et al., 2019
43Galdieria sulphuraria MtSh14,998,6236,160Rossoni AW et al., 2019
44Galdieria sulphuraria SAG 21.9214,317,6005,956Rossoni AW et al., 2019
45Galdieria sulphuraria MS114,906,7177,441Rossoni AW et al., 2019
46Galdieria sulphuraria YNP5578.114,439,6476,118Rossoni AW et al., 2019
47Galdieria sulphuraria 557214,288,8696,472Rossoni AW et al., 2019
48Galdieria sulphuraria 00214,106,3825,912Rossoni AW et al., 2019
49Cyanidioschyzon merolae Soos12,336,8304,406Rossoni AW et al., 2019
50Galdieria sulphuraria RT2215,626,5636,982Rossoni AW et al., 2019
51Galdieria phlegrea Soos14,871,2436,125Rossoni AW et al., 2019
52Chlorella sorokiniana str. 122861,391,26012,169Hovde Blake T. et al., 2018
53Chlorella sorokiniana UTEX 160259,371,60510,384Arriola MB et al., 2018
54Botryococcus braunii Showa v2.1170,200,49223,685Browne DR et al., 2017
55Trebouxia sp. A1-252,896,78813,918Greshake Tzovaras B et al., 2020
56Picochlorum renovo14,391,4249,010Dahlin LR et al., 2019
57Chlorella sp. A9940,934,0378,298Hamada M et al., 2018
58Auxenochlorella protothecoides UTEX 2521,217,6376,041Vogler Brian W. et al., 2018
59Chlorella sorokiniana DOE141257,881,61812,611Hovde Blake T. et al., 2018
60Tetrabaena socialis NIES-571135,779,85214,296Featherston J et al., 2018
61Chlamydomonas eustigma NIES-249966,605,20214,061Hirooka S et al., 2017
62Chlorella sorokiniana UTEX 123058,534,92012,871Hovde Blake T. et al., 2018
63Picochlorum soloecismus DOE10115,252,5786,861Gonzalez-Esquer CR et al., 2018
64Mesostigma viride NIES-296441,698,80929,795Liang Z et al., 2020
65Cyanophora paradoxa CCMP32998,351,90425,518Price DC et al., 2019
66Mesostigma viride CCAC 1140281,412,2419,300Wang S et al., 2020
67Chlorokybus atmophyticus CCAC 022074,335,7269,300Wang S et al., 2020
68Prasinoderma coloniale CCMP141325,323,1947,139Li L et al., 2020
69Mesotaenium endlicherianum SAG 12.97173,768,48211,080Cheng S et al., 2019
70Tetraselmis striata232,085,67546,696Steadman Tyler CR et al., 2019
71Chara braunii S2761,750,992,82335,672Nishiyama T et al., 2018
72Ulva mutabilis Foyn98,484,68912,920De Clerck O et al., 2018
73Micractinium conductrix SAG 241.8060,773,87510,070Arriola MB et al., 2018
74Vitrella brassicaformis CCMP315572,700,66621,239Woo YH et al., 2015
75Ochromonas sp. CCMP1393 v1.456,491,84319,714
76Paraphysomonas imperforata CCMP1604 v1.467,191,10217,134
77Minidiscus variabilis CCMP495 v1.076,188,02225,179
78Scenedesmus sp. NREL 46B-D3 v1.0151,896,78917,399Calhoun S et al., 2021
79Scenedesmus obliquus UTEX B 3031210,263,64422,378Starkenburg SR et al., 2017
80Chloropicon primus CCMP120517,400,6918,327Lemieux C et al., 2019
81Caulerpa lentillifera28,654,2608,818Arimoto A et al., 2019
82Volvox carteri v2.1131,163,21113,076Prochnik SE et al., 2010
83Chlamydomonas reinhardtii CC-503 v5.6111,100,71516,403Merchant SS et al., 2007
84Scenedesmus obliquus UTEX 393107,715,90316,779Carreres B. M. et al., 2017
85Scenedesmus obliquus EN0004 v1.0100,077,84515,053
86Raphidocelis subcapitata NIES-3551,162,69713,383Suzuki S et al., 2018
87Reticulomyxa filosa101,867,04539,963Glöckner G et al., 2014
88Toxoplasma gondii ME4965,668,1208,318Kissinger JC et al., 2003
89Oxytricha trifallax JRB31067,158,11224,578Swart EC et al., 2013
90Tetrahymena thermophila SB210103,014,37526,994Eisen JA et al., 2006
91Plasmodium falciparum 3D723,326,8725,392Gardner MJ et al., 2002
92Paramecium tetraurelia d4_272,094,54339,580Aury JM et al., 2006
93Trichomonas vaginalis G3176,420,06559,679Carlton JM et al., 2007
94Trypanosoma brucei brucei TREU92726,075,4948,787Berriman M et al., 2005
95Giardia intestinalis ATCC 5080311,213,6156,502Morrison HG et al., 2007
96Phaeocystis globosa Pg-G v2.3155,849,26630,220
97Phaeocystis antarctica CCMP1374 v2.2198,936,09437,754
98Chromochloris zofingiensis SAG 211-14 v5.060,130,69915,274Roth MS et al., 2017
99Chondrus crispus Stackhouse104,980,4209,808Collén J et al., 2013
100Cyanidioschyzon merolae strain 10D16,546,7474,803Nozaki H et al., 2007
101Galdieria sulphuraria 074W13,712,0047,174Schönknecht G et al., 2013
102Symbiodinium microadriaticum CCMP2467808,226,71243,403Aranda M et al., 2016
103Chrysochromulina tobin CCMP29159,073,09416,770Hovde BT et al., 2015
104Nannochloropsis oceanica CCMP1779 v2.036,454,93210,641
105Symbiochloris reticulata Africa extracted metagenome v1.058,569,71912,720
106Symbiochloris reticulata Scotland extracted metagenome v1.059,360,52512,315
107Symbiochloris reticulata Switzerland extracted metagenome v1.059,348,13412,701
108Symbiochloris reticulata Spain extracted metagenome v1.056,841,18112,144
109Porphyra umbilicalis isolate 408629187,888,98113,567Brawley SH et al., 2017
110Nannochloropsis gaditana B-3127,589,34210,929Corteggiani Carpinelli E et al., 2014
111Blastocystis hominis Singapore isolate B (sub-type 7)18,817,2456,020Denoeud F et al., 2011
112Saprolegnia parasitica CBS 223.6553,093,24820,113Jiang RH et al., 2013
113Phytophthora infestans T30-4228,543,50517,797Haas BJ et al., 2009
114Thalassiosira oceanica CCMP100592,185,63734,642Lommer M et al., 2012
115Ectocarpus siliculosus Ec 32195,810,61916,271Cock JM et al., 2010
116Auxenochlorella protothecoides 071022,924,6377,013Gao C et al., 2014
117Sorghum bicolor738,540,93235,899Paterson AH et al., 2009
118Ostreococcus tauri RCC1115 v1.014,904,5438,218Blanc-Mathieu R et al., 2017
119Ostreococcus tauri RCC4221 v3.012,916,8587,669Blanc-Mathieu R et al., 2014
120Cryptophyceae sp. CCMP2293 v1.0534,466,77333,051
121Pavlovales sp. CCMP2436 v1.0165,407,58626,034
122Pelagophyceae sp. CCMP2097 v1.085,824,45319,402
123Ochromonadaceae sp. CCMP2298 v1.061,140,75220,195
124Symbiochloris reticulata Spain reference genome v1.058,316,28212,582
125Micromonas commoda NOUM17 (RCC 299)20,989,32610,262Worden AZ et al., 2009
126Micromonas pusilla CCMP154521,945,5459,829Worden AZ et al., 2009
127Asterochloris glomerata Cgr/DA1pho v2.055,816,16010,025Armaleo D et al., 2019
128Emiliania huxleyi CCMP1516 v1.0167,727,05533,341Read BA et al., 2013
129Phytophthora sojae v3.082,601,61826,584Tyler BM et al., 2006
130Phytophthora ramorum v1.166,652,40115,743Tyler BM et al., 2006
131Aureococcus anophagefferens clone 1984 v1.056,660,57811,501Gobler CJ et al., 2011
132Naegleria gruberi v1.040,964,08515,763Fritz-Laylin LK et al., 2010
133Phaeodactylum tricornutum1,311,968377Bowler C et al., 2008
134Chlorella variabilis NC64A v1.046,159,5159,791Blanc G et al., 2010
135Selaginella moellendorffii v1.022,285Banks JA et al., 2011
136Ostreococcus lucimarinus13,204,888Palenik B et al., 2007
137Ostreococcus sp. RCC80913,296,2923,174
138Physcomitrium patens v1.1479,985,34735,938Rensing SA et al., 2008
139Arabidopsis lyrata206,667,935Hu TT et al., 2011
140Schizochytrium aggregatum ATCC 28209 v1.040,854,26010,612
141Aplanochytrium kerguelense PBS07 v1.035,774,16111,892
142Aurantiochytrium limacinum ATCC MYA-1381 v1.060,926,26714,859
143Phytophthora cinnamomi var cinnamomi v1.077,967,40226,131
144Pseudo-nitzschia multiseries CLN-47218,730,80119,703
145Bigelowiella natans CCMP2755 v1.094,701,16321,708Curtis BA et al., 2012
146Guillardia theta CCMP2712 v1.087,159,91524,840Curtis BA et al., 2012
147Phytophthora capsici LT1534 v11.064,023,74819,805Lamour KH et al., 2012
148Coccomyxa subellipsoidea C-169 v2.048,952,5489,851Blanc G et al., 2012
149Fragilariopsis cylindrus CCMP 110280,540,40721,066Mock T et al., 2017
150Thalassiosira pseudonana CCMP 13351,135,583386Bowler C et al., 2008
151Phaeodactylum tricornutum CCAP 1055/1 v2.026,138,75610,025Bowler C et al., 2008
152Thalassiosira pseudonana CCMP 1335 v3.031,301,78211,390Armbrust EV et al., 2004
153Saccharina japonica str. Ja548,536,07318,732Ye N et al., 2015
154Klebsormidium nitens NIES-2285103,921,76616,132Hori K et al., 2014
155Monoraphidium neglectum SAG 48.8769,711,82916,755Bogen C et al., 2013
156Bathycoccus prasinos RCC110515,074,3207,900Moreau H et al., 2012
157Gonium pectorale NIES-2863148,806,07316,290Hanschen ER et al., 2016
158Dunaliella salina CCAP19/18343,704,39218,801Polle Juergen E. W. et al., 2017
159Populus trichocarpa v1.1485,510,91145,555Tuskan GA et al., 2006