Phycocosm
116NameAssembly Length# of GenesPublication
1Cladosiphon okamuranus S strain169,730,75514,750Nishitsuji K et al., 2016
2Galdieria sulphuraria MS114,906,7177,441Rossoni AW et al., 2019
3Galdieria sulphuraria YNP5578.114,439,6476,118Rossoni AW et al., 2019
4Galdieria sulphuraria Azora14,055,7666,305Rossoni AW et al., 2019
5Galdieria sulphuraria MtSh14,998,6236,160Rossoni AW et al., 2019
6Galdieria sulphuraria 557214,288,8696,472Rossoni AW et al., 2019
7Galdieria sulphuraria 00214,106,3825,912Rossoni AW et al., 2019
8Galdieria sulphuraria SAG 21.9214,317,6005,956Rossoni AW et al., 2019
9Cyanidioschyzon merolae Soos12,336,8304,406Rossoni AW et al., 2019
10Galdieria sulphuraria RT2215,626,5636,982Rossoni AW et al., 2019
11Galdieria phelgrea Soos14,871,2436,125Rossoni AW et al., 2019
12Chlorella sorokiniana str. 122861,391,26012,169
13Chlorella sorokiniana UTEX 160259,371,60510,384Arriola MB et al., 2018
14Botryococcus braunii Showa v2.1170,200,49223,685Browne DR et al., 2017
15Trebouxia sp. A1-252,896,78813,918Greshake Tzovaras B et al., 2020
16Chlorella sorokiniana DOE141257,881,61812,611
17Picochlorum renovo14,391,4249,010Dahlin LR et al., N/D
18Chlorella sp. A9940,934,0378,298Hamada M et al., 2018
19Auxenochlorella protothecoides UTEX 2521,217,6376,041
20Tetrabaena socialis NIES-571135,779,85214,296Featherston J et al., 2018
21Chlamydomonas eustigma NIES-249966,605,20214,061Hirooka S et al., 2017
22Chlorella sorokiniana UTEX 123058,534,92012,871
23Picochlorum soloecismus DOE10115,252,5786,861Gonzalez-Esquer CR et al., 2018
24Mesostigma viride NIES-296441,698,80929,795Liang Z et al., 2020
25Cyanophora paradoxa CCMP32998,351,90425,518Price DC et al., 2019
26Mesostigma viride CCAC 1140281,412,2419,300Wang S et al., 2020
27Chlorokybus atmophyticus CCAC 022074,335,7269,300Wang S et al., 2020
28Prasinoderma coloniale CCMP141325,323,1947,139Li L et al., 2020
29Mesotaenium endlicherianum SAG 12.97173,768,48211,080Cheng S et al., 2019
30Tetraselmis striata232,085,67546,696Steadman Tyler CR et al., 2019
31Chara braunii S2761,750,992,82335,672Nishiyama T et al., 2018
32Ulva mutabilis Føyn98,484,68912,920De Clerck O et al., 2018
33Micractinium conductrix SAG 241.8060,773,87510,070Arriola MB et al., 2018
34Vitrella brassicaformis CCMP315572,700,66621,239Woo YH et al., 2015
35Minidiscus variabilis CCMP495 v1.076,188,02225,179
36Ochromonas sp. CCMP1393 v1.456,491,84319,714
37Paraphysomonas imperforata CCMP1604 v1.467,191,10217,134
38Scenedesmus sp. NREL 46B-D3 v1.0151,896,78917,399
39Scenedesmus obliquus UTEX B 3031210,263,64422,378
40Chloropicon primus CCMP120517,400,6918,327Lemieux C et al., 2019
41Caulerpa lentillifera28,654,2608,818Arimoto A et al., 2019
42Volvox carteri v2.1131,163,21113,076Prochnik SE et al., 2010
43Chlamydomonas reinhardtii v5.6111,100,71516,403Merchant SS et al., 2007
44Scenedesmus obliquus UTEX 393107,715,90316,779Carreres BM et al., 2017
45Scenedesmus obliquus EN0004 v1.0100,077,84515,053
46Raphidocelis subcapitata NIES-3551,162,69713,383Suzuki S et al., 2018
47Reticulomyxa filosa101,867,04539,963Glöckner G et al., 2014
48Tetrahymena thermophila SB210103,014,37526,994Eisen JA et al., 2006
49Toxoplasma gondii ME4965,668,1208,318Kissinger JC et al., 2003
50Plasmodium falciparum 3D723,326,8725,392Gardner MJ et al., 2002
51Paramecium tetraurelia d4_272,094,54339,580Aury JM et al., 2006
52Oxytricha trifallax JRB31067,158,11224,578Swart EC et al., N/D
53Trichomonas vaginalis G3176,420,06559,679Carlton JM et al., 2007
54Trypanosoma brucei brucei TREU92726,075,4948,787Berriman M et al., 2005
55Giardia intestinalis ATCC 5080311,213,6156,502Morrison HG et al., 2007
56Phaeocystis globosa Pg-G v2.3155,849,26630,220
57Phaeocystis antarctica CCMP1374 v2.2198,936,09437,754
58Chromochloris zofingiensis SAG 211-1460,130,69915,274Roth MS et al., 2017
59Cyanidioschyzon merolae strain 10D16,546,7474,803Nozaki H et al., 2007
60Chondrus crispus Stackhouse104,980,4209,808Collén J et al., 2013
61Galdieria sulphuraria 074W13,712,0047,174Schönknecht G et al., 2013
62Symbiodinium microadriaticum CCMP2467808,226,71243,403Aranda M et al., 2016
63Chrysochromulina tobin CCMP29159,073,09416,770Hovde BT et al., N/D
64Nannochloropsis oceanica CCMP1779 v2.036,454,93210,641
65Symbiochloris reticulata Africa extracted metagenome v1.058,569,71912,720
66Symbiochloris reticulata Switzerland extracted metagenome v1.059,348,13412,701
67Symbiochloris reticulata Scotland extracted metagenome v1.059,360,52512,315
68Symbiochloris reticulata Spain extracted metagenome v1.056,841,18112,144
69Porphyra umbilicalis isolate 408629187,888,98113,567Brawley SH et al., 2017
70Nannochloropsis gaditana B-3127,589,34210,929Corteggiani Carpinelli E et al., 2014
71Phytophthora infestans T30-4228,543,50517,797Haas BJ et al., 2009
72Blastocystis hominis Singapore isolate B (sub-type 7)18,817,2456,020Denoeud F et al., N/D
73Saprolegnia parasitica CBS 223.6553,093,24820,113Jiang RH et al., 2013
74Ectocarpus siliculosus Ec 32195,810,61916,271Cock JM et al., 2010
75Thalassiosira oceanica CCMP100592,185,63734,642Lommer M et al., 2012
76Auxenochlorella protothecoides 071022,924,6377,013Gao C et al., 2014
77Sorghum bicolor738,540,93235,899Paterson AH et al., 2009
78Ostreococcus tauri RCC4221 v3.012,916,8587,669Blanc-Mathieu R et al., 2014
79Ostreococcus tauri RCC1115 v1.014,904,5438,218Blanc-Mathieu R et al., 2017
80Cryptophyceae sp. CCMP2293 v1.0534,466,77333,051
81Pavlovales sp. CCMP2436 v1.0165,407,58626,034
82Pelagophyceae sp. CCMP2097 v1.085,824,45319,402
83Ochromonadaceae sp. CCMP2298 v1.061,140,75220,195
84Symbiochloris reticulata Spain reference genome v1.058,316,28212,582
85Micromonas commoda NOUM17 (RCC 299)20,989,32610,262Worden AZ et al., 2009
86Micromonas pusilla CCMP154521,945,5459,829Worden AZ et al., 2009
87Asterochloris glomerata Cgr/DA1pho v2.055,816,16010,025Armaleo D et al., 2019
88Emiliania huxleyi CCMP1516 v1.0167,727,05533,341Read BA et al., 2013
89Phytophthora ramorum v1.166,652,40115,743Tyler BM et al., 2006
90Phytophthora sojae v3.082,601,61826,584Tyler BM et al., 2006
91Aureococcus anophagefferens clone 198456,660,57811,501Gobler CJ et al., 2011
92Naegleria gruberi v1.040,964,08515,763Fritz-Laylin LK et al., 2010
93Chlorella variabilis NC64A46,159,5159,791Blanc G et al., 2010
94Selaginella moellendorffii v1.022,285Banks JA et al., 2011
95Ostreococcus lucimarinus13,204,888Palenik B et al., 2007
96Ostreococcus sp. RCC80913,296,2923,174
97Physcomitrella patens subsp patens v1.1479,985,34735,938Rensing SA et al., 2008
98Arabidopsis lyrata206,667,935Hu TT et al., 2011
99Schizochytrium aggregatum ATCC 2820940,854,26010,612
100Aplanochytrium kerguelense PBS07 v1.035,774,16111,892
101Aurantiochytrium limacinum ATCC MYA-138160,926,26714,859
102Phytophthora cinnamomi var cinnamomi v1.077,967,40226,131
103Pseudo-nitzschia multiseries CLN-47218,730,80119,703
104Guillardia theta CCMP271287,159,91524,840Curtis BA et al., 2012
105Bigelowiella natans CCMP275594,701,16321,708Curtis BA et al., 2012
106Phytophthora capsici LT1534 v11.064,023,74819,805Lamour KH et al., 2012
107Coccomyxa subellipsoidea C-16948,952,5489,851Blanc G et al., 2012
108Fragilariopsis cylindrus CCMP 110280,540,40721,066Mock T et al., 2017
109Thalassiosira pseudonana CCMP 133531,301,78211,390Armbrust EV et al., 2004
110Phaeodactylum tricornutum CCAP 1055/1 v2.026,138,75610,025Bowler C et al., 2008
111Klebsormidium nitens NIES-2285103,921,76616,132Hori K et al., 2014
112Monoraphidium neglectum SAG 48.8769,711,82916,755Bogen C et al., 2013
113Bathycoccus prasinos RCC110515,074,3207,900Moreau H et al., 2012
114Gonium pectorale NIES-2863148,806,07316,290Hanschen ER et al., 2016
115Dunaliella salina CCAP19/18343,704,39218,801Polle JEW et al., 2017
116Populus trichocarpa v1.1485,510,91145,555Tuskan GA et al., 2006