187NameAssembly Length# of GenesPublication
1Paulinella micropora KR01707,124,08515,326Lhee D et al., 2021
2Cyclotella cryptica CCMP332 v2.0171,139,48314,429Traller JC et al., 2016
3Chlorokybus atmophyticus CCAC 022074,335,7268,693Wang S et al., 2020
4Mesostigma viride NIES-296441,698,80916,232Liang Z et al., 2020
5Mesotaenium endlicherianum SAG12.97173,768,48210,300Cheng S et al., 2019
6Gracilaria domingensis SP 40083777,739,7769,746Nakamura-Gouvea N et al., 2022
7Raphidocelis subcapitata NIES-3551,162,69713,088Suzuki S et al., 2018
8Botryococcus braunii Showa170,200,49213,943Browne DR et al., 2017
9Mesostigma viride CCAC 1140281,412,2418,789Wang S et al., 2020
10Spirogloea muscicola CCAC 0214171,136,97524,093Cheng S et al., 2019
11Klebsormidium nitens NIES-2285 v1.1103,921,76615,568Hori K et al., 2014
12Astrephomene gubernaculifera NIES-4017103,829,65013,067Yamashita S et al., 2021
13Chlamydomonas reinhardtii CC-4532 v6.1114,035,50016,090Craig RJ et al., 2023
14Mayamaea pseudoterrestris NIES-428030,627,22910,680Suzuki S et al., 2022
15Fragilaria crotonensis SAG 28.9661,849,50418,721Zepernick BN et al., 2022
16Chaetoceros tenuissimus NIES-371541,001,28817,253Hongo Y et al., 2021
17Ostreobium queketti SAG 6.99151,902,0899,649Iha Cintia et al., 2021
18Nannochloropsis gaditana CCMP189430,865,7418,928Schwartz AS et al., 2018
19Nitzschia putrida NIES-423934,998,30713,794Kamikawa R et al., 2022
20Alaria esculenta A1487,803,96218,078Bringloe TT et al., 2022
21Nannochloris desiccata UTEX 252621,550,5258,818Sanders CK et al., 2022
22Helicosporidium sp. ATCC 5092012,373,8205,602Pombert JF et al., 2014
23Nannochloris desiccata UTEX 243720,738,0057,973Sanders CK et al., 2022
24Monodopsis strain C7359,696,95712,958Yang HP et al., 2021
25Monodopsis strain C14160,466,28312,961Yang HP et al., 2021
26Vischeria strain C74106,485,30315,625Yang HP et al., 2021
27Macrocystis pyrifera CI_03 v1.0537,452,65925,919
28Pedinomonas minor SAG 1965-354,966,53910,504Xu Y et al., 2022
29Pedinophyceae sp. YPF-70127,899,9197,759Repetti SI et al., 2022
30Zygnema circumcarinatum UTEX 155971,310,52712,038Feng Xuehuan et al., 2023
31Zygnema cf. cylindricum SAG 698-1a359,785,76014,200Feng Xuehuan et al., 2023
32Zygnema circumcarinatum UTEX 156067,280,74512,436Feng Xuehuan et al., 2023
33Scenedesmus obliquus UTEX 3031205,013,58413,349
34Coccomyxa subellipsoidea C-169 v3.048,852,66610,893Blanc G et al., 2012
35Porphyridium purpureum CCMP132822,192,3388,278Bhattacharya D et al., 2013
36Microglena sp. YARC572,689,86519,590Ye N et al., 2022
37Micromonas sp. AD1 metagenome extracted assembly21,112,59311,269Duncan A et al., 2022
38Mesotaenium kramstae Lemmermann NIES-657 v3.0331,691,28115,982
39Scenedesmus obliquus UTEX 393 v2.0107,859,68019,017
40Cafeteria roenbergensis BVI36,283,8878,555Hackl T et al., 2020
41Chlamydomonas priscuii UWO241211,641,45614,754Stahl-Rommel S et al., 2022
42Monoraphidium minutum 26B-AM v1.068,170,63015,337Calhoun Sara et al., 2022
43Enallax costatus CCAP 276/31 v1.1127,564,97519,308
44Tetradesmus deserticola SNI-2 v1.1198,160,74017,197
45Flechtneria rotunda SEV3VF49 v1.176,784,65016,599
46Tetradesmus obliquus UTEX 72 v1.1107,156,68216,985
47Hyphochytrium catenoides ATCC 1871968,540,53818,481Leonard G et al., 2018
48Desmodesmus armatus UTEX B 2533 v2.0122,633,16215,634
49Chromera velia CCMP2878193,889,73024,133Woo YH et al., 2015
50Labyrinthula sp. SR_Ha_C50,948,1198,488Tan MH et al., 2021
51Hondaea fermentalgiana CCAP_4062/338,943,35011,853Seddiki K et al., 2018
52Nitzschia inconspicua GAI-293 v2.099,706,97017,968Oliver A et al., 2021
53Tribonema minus UTEX B 3156 v1.0158,345,07418,290Mahan KM et al., 2021
54Hyaloperonospora arabidopsidis Emoy2 v2.078,897,8149,138Baxter L et al., 2010
55Scenedesmus obliquus var. DOE0013 v1.0102,771,90515,938
56Scenedesmus obliquus var. UTEX 1450 v1.0104,043,31216,565
57Scenedesmus obliquus var. UTEX2630 v1.0106,020,69216,604
58Cladocopium goreaui SCF055-011,027,792,01635,913Liu H et al., 2018
59Breviolum minutum609,476,48547,014Shoguchi E et al., 2013
60Fugacium kawagutii CCMP24681,048,482,93426,609Lin S et al., 2015
61Seminavis robusta D6125,572,60337,455Osuna-Cruz CM et al., 2020
62Chrysochromulina parva Lackey65,764,75028,185
63Amoebophrya ceratii AT5.287,690,81719,925John U et al., 2019
64Nemacystus decipiens Onna-1153,973,81117,099Nishitsuji K et al., 2019
65Nannochloropsis salina CCMP177627,757,2528,927Ohan JA et al., 2019
66Fistulifera solaris JPCC DA058049,736,63320,413Tanaka T et al., 2015
67Undaria pinnatifida M23511,280,17314,300Shan T et al., 2020
68Pyropia yezoensis U-5143,483,96310,327Nakamura Y et al., 2013
69Gracilariopsis chorda isolate SKKU-201592,180,03810,806Lee J et al., 2018
70Chlamydomonas incerta SAG 7.73129,236,42116,957Craig RJ et al., 2021
71Chlamydomonas schloesseri CCAP 11/173130,201,00216,268Craig RJ et al., 2021
72Picocystis sp. ML29,463,4325,613Junkins EN et al., 2019
73Edaphochlamys debaryana CCAP 11/70142,143,00220,450Craig RJ et al., 2021
74Cladosiphon okamuranus S strain169,730,75514,750Nishitsuji K et al., 2016
75Galdieria sulphuraria Azora14,055,7666,305Rossoni AW et al., 2019
76Galdieria sulphuraria MtSh14,998,6236,160Rossoni AW et al., 2019
77Galdieria sulphuraria SAG 21.9214,317,6005,956Rossoni AW et al., 2019
78Galdieria sulphuraria MS114,906,7177,441Rossoni AW et al., 2019
79Galdieria sulphuraria YNP5578.114,439,6476,118Rossoni AW et al., 2019
80Galdieria sulphuraria 557214,288,8696,472Rossoni AW et al., 2019
81Galdieria sulphuraria 00214,106,3825,912Rossoni AW et al., 2019
82Cyanidioschyzon merolae Soos12,336,8304,406Rossoni AW et al., 2019
83Galdieria sulphuraria RT2215,626,5636,982Rossoni AW et al., 2019
84Galdieria phlegrea Soos14,871,2436,125Rossoni AW et al., 2019
85Chlorella sorokiniana str. 122861,391,26012,169Hovde Blake T. et al., 2018
86Chlorella sorokiniana UTEX 160259,371,60510,384Arriola MB et al., 2018
87Botryococcus braunii Showa v2.1170,200,49223,685Browne DR et al., 2017
88Trebouxia sp. A1-252,896,78813,918Greshake Tzovaras B et al., 2020
89Picochlorum renovo14,391,4249,010Dahlin LR et al., 2019
90Chlorella sp. A9940,934,0378,298Hamada M et al., 2018
91Auxenochlorella protothecoides UTEX 2521,217,6376,041Vogler Brian W. et al., 2018
92Chlorella sorokiniana DOE141257,881,61812,611Hovde Blake T. et al., 2018
93Tetrabaena socialis NIES-571135,779,85214,296Featherston J et al., 2018
94Chlamydomonas eustigma NIES-249966,605,20214,061Hirooka S et al., 2017
95Chlorella sorokiniana UTEX 123058,534,92012,871Hovde Blake T. et al., 2018
96Picochlorum soloecismus DOE10115,252,5786,861Gonzalez-Esquer CR et al., 2018
97Cyanophora paradoxa CCMP32998,351,90425,518Price DC et al., 2019
98Prasinoderma coloniale CCMP141325,323,1947,139Li L et al., 2020
99Tetraselmis striata232,085,67546,696Steadman Tyler CR et al., 2019
100Chara braunii S2761,750,992,82335,672Nishiyama T et al., 2018
101Ulva mutabilis Foyn98,484,68912,920De Clerck O et al., 2018
102Micractinium conductrix SAG 241.8060,773,87510,070Arriola MB et al., 2018
103Vitrella brassicaformis CCMP315572,700,66621,239Woo YH et al., 2015
104Ochromonas sp. CCMP1393 v1.456,491,84319,714
105Paraphysomonas imperforata CCMP1604 v1.467,191,10217,134
106Minidiscus variabilis CCMP495 v1.076,188,02225,179
107Scenedesmus sp. NREL 46B-D3 v1.0151,896,78917,399Calhoun S et al., 2021
108Chloropicon primus CCMP120517,400,6918,327Lemieux C et al., 2019
109Caulerpa lentillifera28,654,2608,818Arimoto A et al., 2019
110Volvox carteri v2.1131,163,21113,076Prochnik SE et al., 2010
111Chlamydomonas reinhardtii CC-503 v5.6111,100,71516,403Merchant SS et al., 2007
112Scenedesmus obliquus UTEX 393107,715,90316,779Carreres B. M. et al., 2017
113Scenedesmus obliquus EN0004 v1.0100,077,84515,053
114Raphidocelis subcapitata NIES-3551,162,69713,383Suzuki S et al., 2018
115Reticulomyxa filosa101,867,04539,963Glöckner G et al., 2014
116Toxoplasma gondii ME4965,668,1208,318Kissinger JC et al., 2003
117Oxytricha trifallax JRB31067,158,11224,578Swart EC et al., 2013
118Tetrahymena thermophila SB210103,014,37526,994Eisen JA et al., 2006
119Plasmodium falciparum 3D723,326,8725,392Gardner MJ et al., 2002
120Paramecium tetraurelia d4_272,094,54339,580Aury JM et al., 2006
121Trichomonas vaginalis G3176,420,06559,679Carlton JM et al., 2007
122Trypanosoma brucei brucei TREU92726,075,4948,787Berriman M et al., 2005
123Giardia intestinalis ATCC 5080311,213,6156,502Morrison HG et al., 2007
124Phaeocystis globosa Pg-G v2.3155,849,26630,220
125Phaeocystis antarctica CCMP1374 v2.2198,936,09437,754
126Chromochloris zofingiensis SAG 211-14 v5.060,130,69915,274Roth MS et al., 2017
127Chondrus crispus Stackhouse104,980,4209,808Collén J et al., 2013
128Cyanidioschyzon merolae strain 10D16,546,7474,803Nozaki H et al., 2007
129Galdieria sulphuraria 074W13,712,0047,174Schönknecht G et al., 2013
130Symbiodinium microadriaticum CCMP2467808,226,71243,403Aranda M et al., 2016
131Chrysochromulina tobin CCMP29159,073,09416,770Hovde BT et al., 2015
132Nannochloropsis oceanica CCMP1779 v2.036,454,93210,641
133Symbiochloris reticulata Africa extracted metagenome v1.058,569,71912,720
134Symbiochloris reticulata Scotland extracted metagenome v1.059,360,52512,315
135Symbiochloris reticulata Switzerland extracted metagenome v1.059,348,13412,701
136Symbiochloris reticulata Spain extracted metagenome v1.056,841,18112,144
137Porphyra umbilicalis isolate 408629187,888,98113,567Brawley SH et al., 2017
138Nannochloropsis gaditana B-3127,589,34210,929Corteggiani Carpinelli E et al., 2014
139Blastocystis hominis Singapore isolate B (sub-type 7)18,817,2456,020Denoeud F et al., 2011
140Saprolegnia parasitica CBS 223.6553,093,24820,113Jiang RH et al., 2013
141Phytophthora infestans T30-4228,543,50517,797Haas BJ et al., 2009
142Thalassiosira oceanica CCMP100592,185,63734,642Lommer M et al., 2012
143Ectocarpus siliculosus Ec 32195,810,61916,271Cock JM et al., 2010
144Auxenochlorella protothecoides 071022,924,6377,013Gao C et al., 2014
145Sorghum bicolor738,540,93235,899Paterson AH et al., 2009
146Ostreococcus tauri RCC1115 v1.014,904,5438,218Blanc-Mathieu R et al., 2017
147Ostreococcus tauri RCC4221 v3.012,916,8587,669Blanc-Mathieu R et al., 2014
148Cryptophyceae sp. CCMP2293 v1.0534,466,77333,051Dorrell RG et al., 2023
149Pavlovales sp. CCMP2436 v1.0165,407,58626,034Dorrell RG et al., 2023
150Pelagophyceae sp. CCMP2097 v1.085,824,45319,402Dorrell RG et al., 2023
151Ochromonadaceae sp. CCMP2298 v1.061,140,75220,195Dorrell RG et al., 2023
152Symbiochloris reticulata Spain reference genome v1.058,316,28212,582
153Micromonas commoda NOUM17 (RCC 299)20,989,32610,262Worden AZ et al., 2009
154Micromonas pusilla CCMP154521,945,5459,829Worden AZ et al., 2009
155Asterochloris glomerata Cgr/DA1pho v2.055,816,16010,025Armaleo D et al., 2019
156Emiliania huxleyi CCMP1516 v1.0167,727,05533,341Read BA et al., 2013
157Naegleria gruberi v1.040,964,08515,763Fritz-Laylin LK et al., 2010
158Phytophthora sojae v3.082,601,61826,584Tyler BM et al., 2006
159Phytophthora ramorum v1.166,652,40115,743Tyler BM et al., 2006
160Aureococcus anophagefferens clone 1984 v1.056,660,57811,501Gobler CJ et al., 2011
161Phaeodactylum tricornutum1,311,968377Bowler C et al., 2008
162Chlorella variabilis NC64A v1.046,159,5159,791Blanc G et al., 2010
163Selaginella moellendorffii v1.022,285Banks JA et al., 2011
164Ostreococcus lucimarinus13,204,888Palenik B et al., 2007
165Ostreococcus sp. RCC80913,296,2923,174
166Physcomitrium patens v1.1479,985,34735,938Rensing SA et al., 2008
167Arabidopsis lyrata206,667,935Hu TT et al., 2011
168Schizochytrium aggregatum ATCC 28209 v1.040,854,26010,612
169Aplanochytrium kerguelense PBS07 v1.035,774,16111,892
170Aurantiochytrium limacinum ATCC MYA-1381 v1.060,926,26714,859
171Phytophthora cinnamomi var cinnamomi v1.077,967,40226,131
172Pseudo-nitzschia multiseries CLN-47218,730,80119,703
173Bigelowiella natans CCMP2755 v1.094,701,16321,708Curtis BA et al., 2012
174Guillardia theta CCMP2712 v1.087,159,91524,840Curtis BA et al., 2012
175Phytophthora capsici LT1534 v11.064,023,74819,805Lamour KH et al., 2012
176Fragilariopsis cylindrus CCMP 110280,540,40721,066Mock T et al., 2017
177Thalassiosira pseudonana CCMP 13351,135,583386Bowler C et al., 2008
178Phaeodactylum tricornutum CCAP 1055/1 v2.026,138,75610,025Bowler C et al., 2008
179Thalassiosira pseudonana CCMP 1335 v3.031,301,78211,390Armbrust EV et al., 2004
180Diacronema lutheri NIVA-4/9243,502,67113,777Hulatt CJ et al., 2021
181Saccharina japonica str. Ja548,536,07318,732Ye N et al., 2015
182Monoraphidium neglectum SAG 48.8769,711,82916,755Bogen C et al., 2013
183Zygnema circumcarinatum SAG 698-1b70,999,79210,678Feng Xuehuan et al., 2023
184Bathycoccus prasinos RCC110515,074,3207,900Moreau H et al., 2012
185Gonium pectorale NIES-2863148,806,07316,290Hanschen ER et al., 2016
186Dunaliella salina CCAP19/18343,704,39218,801Polle Juergen E. W. et al., 2017
187Populus trichocarpa v1.1485,510,91145,555Tuskan GA et al., 2006