238NameAssembly Length# of GenesPublication
1Pleodorina starrii NIES-4479136,124,60513,394Takahashi K et al., 2023
2Pleodorina starrii NIES-4481134,979,98113,363Takahashi K et al., 2023
3Nereocystis luetkeana NB12FB3 v1.0449,789,16322,952
4Dicrateria rotunda RCC4501 v1.086,901,46035,250
5Saccharina latissima SL-CT1-FG3 v1.0615,545,555DeWeese K et al., 2025
6Bremia lactucae SF5115,935,6648,303Fletcher K et al., 2019
7Peronosclerospora sorghi P6325,250,99413,951Fletcher K et al., 2023
8Peronospora effusa UA20201358,578,4338,867Fletcher K et al., 2022
9Euglena gracilis CCAP 1224/5Z v1.02,147,483,64718,428Chen Z et al., 2024
10Pavlova sp. RCC6257 v1.077,856,18524,303
11Parmales sp. scaly parma v1.030,979,89711,651Ban H et al., 2023
12Triparma laevis f. inornata v1.042,573,55012,794Ban H et al., 2023
13Cylindrotheca closterium CA1.15 DCG092355,068,44420,379Audoor S et al., 2024
14Coccomyxa pringsheimii SAG 216-750,915,8439,499Puginier C et al., 2024
15Apatococcus lobatus SAG 2145106,452,46310,265Puginier C et al., 2024
16Myrmecia bisecta SAG 204383,484,05411,697Puginier C et al., 2024
17Elliptochloris bilobata SAG 245.8052,254,6828,287Puginier C et al., 2024
18Cyanophora paradoxa CCMP32998,351,90421,535Price DC et al., 2019
19Mesotaenium kramstae Lemmermann NIES-658 v2.0331,172,79614,318
20Desmodesmus armatus isolate SE107 v1.0116,304,00917,675Knoshaug Eric P. et al., 2020
21Trebouxia sp. A1-252,896,7889,683Greshake Tzovaras B et al., 2020
22Limnomonas spitsbergensis CCryo_02-99_CH260,248,09014,963Hulatt CJ et al., 2024
23Tetrabaena socialis NIES-571135,779,85212,454Featherston J et al., 2018
24Galdieria sulphuraria Azora14,055,7665,830Rossoni AW et al., 2019
25Galdieria sulphuraria MS114,906,7176,826Rossoni AW et al., 2019
26Cyanidioschyzon merolae Soos12,336,8304,224Rossoni AW et al., 2019
27Galdieria phlegrea Soos14,871,2435,850Rossoni AW et al., 2019
28Galdieria sulphuraria 557214,288,8696,091Rossoni AW et al., 2019
29Galdieria sulphuraria RT2215,626,5636,311Rossoni AW et al., 2019
30Galdieria sulphuraria MtSh14,998,6235,628Rossoni AW et al., 2019
31Galdieria sulphuraria SAG21.9214,317,6005,572Rossoni AW et al., 2019
32Galdieria sulphuraria 00214,106,3825,641Rossoni AW et al., 2019
33Galdieria sulphuraria YNP5578.114,439,6475,658Rossoni AW et al., 2019
34Nannochloropsis salina CCMP177627,757,2528,570Ohan JA et al., 2019
35Prymnesium parvum 12B193,538,11422,090Wisecaver JH et al., 2023
36Chloropicon primus CCMP120517,400,6918,504Lemieux C et al., 2019
37Nannochloropsis oceanica C018 v1.026,405,5958,768Estrada-Graf A et al., 2025
38Chromochloris zofingiensis var. SAG 211-14 v6.058,777,83116,265
39Bacillariophyceae sp. MOSAICH1_1 v1.032,074,74113,169Boulton W et al., 2025
40Galdieria yellowstonensis 108.79 E1114,511,5886,501Cho CH et al., 2023
41Cyanidium caldarium DBV 063 E58,787,3564,770Cho CH et al., 2023
42Cyanidiococcus yangmingshanensis 8.1.23 F712,020,1484,748Cho CH et al., 2023
43Rhodosorus marinus CCMP133831,189,4108,045Lee Y et al., 2023
44Scenedesmus obliquus UTEX 3031 haplotype 1101,592,43411,826Biondi Thomas C. et al., 2024
45Scenedesmus obliquus UTEX 3031 haplotype 2103,421,15012,494Biondi Thomas C. et al., 2024
46Conticribra weissflogii CCMP 1336231,500,93019,531Li L et al., 2021
47Gracilaria caudata M-176 S6730,776,0058,185Lipinska AP et al., 2023
48Gracilaria chilensis NLEC103-M979,767,6777,217Lipinska AP et al., 2023
49Entomoneis sp. UTEX 11IV18-2A FL v1.0459,747,08732,720
50Scenedesmus obliquus SAG 2326 v1.0104,249,35517,007
51Scenedesmus sp. WC-1 v1.0102,320,95717,012
52Scenedesmus dimorphus UTEX 1237 v1.0102,569,70017,373
53Haematococcus lacustris Liv1 v1.2291,505,22021,373
54Haematococcus lacustris NIES-144171,794,63128,279Morimoto D et al., 2020
55Volvox reticuliferus NIES-3786133,961,72812,974Yamamoto K et al., 2021
56Volvox africanus NIES-3780129,328,46912,622Yamamoto K et al., 2021
57Volvox reticuliferus NIES-3785133,065,14213,178Yamamoto K et al., 2021
58Gracilaria gracilis GNS1m76,009,1568,693Lipinska AP et al., 2023
59Gracilaria vermiculophylla HapMaleFtJ-201745,957,1386,327Lipinska AP et al., 2023
60Sargassum fusiforme394,427,66117,495Wang S et al., 2020
61Chlorella sorokiniana DOE141257,881,61810,257Hovde Blake T. et al., 2018
62Chlorella sorokiniana UTEX 160259,371,6059,245Arriola MB et al., 2018
63Chlorella sorokiniana UTEX 123058,534,92012,209Hovde Blake T. et al., 2018
64Chlorella sorokiniana strain 122861,391,26011,701Hovde Blake T. et al., 2018
65Micractinium conductrix SAG 241.8060,773,8758,739Arriola MB et al., 2018
66Auxenochlorella protothecoides UTEX 2521,217,6375,688Vogler Brian W. et al., 2018
67Nannochloropsis oceanica CCAP849/1029,986,04910,044
68Seminavis robusta D6125,572,60333,143Osuna-Cruz CM et al., 2020
69Chlamydomonas eustigma NIES-249966,605,20213,365Hirooka S et al., 2017
70Trebouxiophyceae sp. bin 3300059473_978 v1.016,200,1887,783Oliver T et al., 2024
71Trebouxiophyceae sp. bin 3300059473_6682 v1.018,077,4458,628Oliver T et al., 2024
72Chlorellaceae sp. bin 3300059473_4402 v1.014,333,5788,227Oliver T et al., 2024
73Chlorellaceae sp. bin 3300059473_4966 v1.014,819,4888,098Oliver T et al., 2024
74Amoebophrya ceratii AT5.287,690,81718,158John U et al., 2019
75Undaria pinnatifida M23511,280,17312,499Shan T et al., 2020
76Neopyropia yezoensis U-5143,483,9638,598Nakamura Y et al., 2013
77Prasinoderma coloniale CCMP141325,323,1946,927Li L et al., 2020
78Fistulifera solaris JPCC DA058049,736,63314,395Tanaka T et al., 2015
79Proteomonas sulcata CCMP 1175 v1.1270,343,09534,130
80Chloromonas remiasii CCCryo 005-99 v1.0493,134,01538,828
81Polarella glacialis CCMP20882,147,483,64734,066Stephens TG et al., 2020
82Polarella glacialis CCMP13832,147,483,64737,736Stephens TG et al., 2020
83Paulinella micropora KR01707,124,08515,326Lhee D et al., 2021
84Cyclotella cryptica CCMP332 v2.0171,139,48314,429Traller JC et al., 2016
85Chlorokybus atmophyticus CCAC 022074,335,7268,693Wang S et al., 2020
86Mesostigma viride NIES-296441,698,80916,232Liang Z et al., 2020
87Mesotaenium endlicherianum SAG 12.97173,768,48210,300Cheng S et al., 2019
88Gracilaria domingensis SP 40083777,739,7769,746Nakamura-Gouvea N et al., 2022
89Raphidocelis subcapitata NIES-3551,162,69713,088Suzuki S et al., 2018
90Botryococcus braunii Showa170,200,49213,943Browne DR et al., 2017
91Mesostigma viride CCAC 1140281,412,2418,789Wang S et al., 2020
92Spirogloea muscicola CCAC 0214171,136,97524,093Cheng S et al., 2019
93Klebsormidium nitens NIES-2285 v1.1103,921,76615,568Hori K et al., 2014
94Astrephomene gubernaculifera NIES-4017103,829,65013,067Yamashita S et al., 2021
95Chlamydomonas reinhardtii CC-4532 v6.1114,035,50016,090Craig RJ et al., 2023
96Mayamaea pseudoterrestris NIES-428030,627,22910,680Suzuki S et al., 2022
97Fragilaria crotonensis SAG 28.9661,849,50418,721Zepernick BN et al., 2022
98Chaetoceros tenuissimus NIES-371541,001,28817,253Hongo Y et al., 2021
99Ostreobium quekettii SAG 6.99151,902,0899,649Iha Cintia et al., 2021
100Nitzschia putrida NIES-423934,998,30713,794Kamikawa R et al., 2022
101Nannochloropsis gaditana CCMP189430,865,7418,928Schwartz AS et al., 2018
102Alaria esculenta A1487,803,96218,078Bringloe TT et al., 2022
103Nannochloris desiccata UTEX 252621,550,5258,818Sanders CK et al., 2022
104Helicosporidium sp. ATCC 5092012,373,8205,602Pombert JF et al., 2014
105Nannochloris desiccata UTEX 243720,738,0057,973Sanders CK et al., 2022
106Monodopsis strain C7359,696,95712,958Yang HP et al., 2021
107Monodopsis strain C14160,466,28312,961Yang HP et al., 2021
108Vischeria strain C74106,485,30315,625Yang HP et al., 2021
109Macrocystis pyrifera CI_03 v1.0537,452,65925,919Diesel J et al., 2023
110Pedinophyceae sp. YPF-70127,899,9197,759Repetti SI et al., 2022
111Pedinomonas minor SAG 1965-354,966,53910,504Xu Y et al., 2022
112Zygnema cf. cylindricum SAG 698-1a359,785,76014,200Feng X et al., 2024
113Zygnema circumcarinatum UTEX 155971,310,52712,038Feng X et al., 2024
114Zygnema circumcarinatum UTEX 156067,280,74512,436Feng X et al., 2024
115Scenedesmus obliquus UTEX 3031205,013,58413,349Biondi Thomas C. et al., 2024
116Coccomyxa subellipsoidea C-169 v3.048,852,66610,893Blanc G et al., 2012
117Porphyridium purpureum CCMP132822,192,3388,278Bhattacharya D et al., 2013
118Microglena sp. YARC572,689,86519,590Ye N et al., 2022
119Micromonas sp. AD1 metagenome extracted assembly21,112,59311,269Duncan A et al., 2022
120Mesotaenium kramstae Lemmermann NIES-657 v3.0331,691,28115,982
121Scenedesmus obliquus UTEX 393 v2.0107,859,68019,017
122Cafeteria roenbergensis BVI36,283,8878,555Hackl T et al., 2020
123Chlamydomonas priscuii UWO241211,641,45614,754Stahl-Rommel S et al., 2022
124Monoraphidium minutum 26B-AM v1.068,170,63015,337Calhoun Sara et al., 2022
125Tetradesmus deserticola SNI-2 v1.1198,160,74017,197
126Flechtneria rotunda SEV3VF49 v1.176,784,65016,599
127Tetradesmus obliquus UTEX 72 v1.1107,156,68216,985
128Enallax costatus CCAP 276/31 v1.1127,564,97519,308
129Hyphochytrium catenoides ATCC 1871968,540,53818,481Leonard G et al., 2018
130Desmodesmus armatus UTEX B 2533 v2.0122,633,16215,634
131Chromera velia CCMP2878193,889,73024,133Woo YH et al., 2015
132Labyrinthula sp. SR_Ha_C50,948,1198,488Tan MH et al., 2021
133Hondaea fermentalgiana CCAP_4062/338,943,35011,853Seddiki K et al., 2018
134Nitzschia inconspicua GAI-293 v2.099,706,97017,968Oliver A et al., 2021
135Tribonema minus UTEX B 3156 v1.0158,345,07418,290Mahan KM et al., 2021
136Hyaloperonospora arabidopsidis Emoy2 v2.078,897,8149,138Baxter L et al., 2010
137Scenedesmus obliquus var. DOE0013 v1.0102,771,90515,938
138Scenedesmus obliquus var. UTEX 1450 v1.0104,043,31216,565
139Scenedesmus obliquus var. UTEX2630 v1.0106,020,69216,604
140Fugacium kawagutii CCMP24681,048,482,93426,609Lin S et al., 2015
141Cladocopium goreaui SCF055-011,027,792,01635,913Liu H et al., 2018
142Breviolum minutum609,476,48547,014Shoguchi E et al., 2013
143Nemacystus decipiens Onna-1153,973,81117,099Nishitsuji K et al., 2019
144Chlamydomonas schloesseri CCAP 11/173130,201,00216,268Craig RJ et al., 2021
145Picocystis sp. ML29,463,4325,613Junkins EN et al., 2019
146Chlamydomonas incerta SAG 7.73129,236,42116,957Craig RJ et al., 2021
147Edaphochlamys debaryana CCAP 11/70142,143,00220,450Craig RJ et al., 2021
148Cladosiphon okamuranus S strain169,730,75514,750Nishitsuji K et al., 2016
149Picochlorum renovo14,391,4249,010Dahlin LR et al., 2019
150Picochlorum soloecismus DOE10115,252,5786,861Gonzalez-Esquer CR et al., 2018
151Chlorella sp. A9940,934,0378,298Hamada M et al., 2018
152Cyanophora paradoxa CCMP32998,351,90425,518Price DC et al., 2019
153Tetraselmis striata232,085,67546,696Steadman Tyler CR et al., 2019
154Chara braunii S2761,750,992,82335,672Nishiyama T et al., 2018
155Vitrella brassicaformis CCMP315572,700,66621,239Woo YH et al., 2015
156Ochromonas sp. CCMP1393 v1.456,491,84319,714
157Paraphysomonas imperforata CCMP1604 v1.467,191,10217,134
158Minidiscus variabilis CCMP495 v1.076,188,02225,179
159Scenedesmus sp. NREL 46B-D3 v1.0151,896,78917,399Calhoun S et al., 2021
160Caulerpa lentillifera28,654,2608,818Arimoto A et al., 2019
161Chlamydomonas reinhardtii CC-503 v5.6111,100,71516,403Merchant SS et al., 2007
162Volvox carteri v2.1131,163,21113,076Prochnik SE et al., 2010
163Scenedesmus obliquus EN0004 v1.0100,077,84515,053
164Reticulomyxa filosa101,867,04539,963Glöckner G et al., 2014
165Tetrahymena thermophila SB210103,014,37526,994Eisen JA et al., 2006
166Plasmodium falciparum 3D723,326,8725,392Gardner MJ et al., 2002
167Toxoplasma gondii ME4965,668,1208,318Kissinger JC et al., 2003
168Oxytricha trifallax JRB31067,158,11224,578Swart EC et al., 2013
169Paramecium tetraurelia d4_272,094,54339,580Aury JM et al., 2006
170Trichomonas vaginalis G3176,420,06559,679Carlton JM et al., 2007
171Giardia intestinalis ATCC 5080311,213,6156,502Morrison HG et al., 2007
172Trypanosoma brucei brucei TREU92726,075,4948,787Berriman M et al., 2005
173Phaeocystis antarctica CCMP1374 v2.2198,936,09437,754
174Phaeocystis globosa Pg-G v2.3155,849,26630,220
175Chondrus crispus Stackhouse104,980,4209,808Collén J et al., 2013
176Cyanidioschyzon merolae strain 10D16,546,7474,803Nozaki H et al., 2007
177Galdieria sulphuraria 074W13,712,0047,174Schönknecht G et al., 2013
178Symbiodinium microadriaticum CCMP2467808,226,71243,403Aranda M et al., 2016
179Chrysochromulina tobin CCMP29159,073,09416,770Hovde BT et al., 2015
180Nannochloropsis oceanica CCMP1779 v2.036,454,93210,641
181Symbiochloris reticulata Scotland extracted metagenome v1.059,360,52512,315
182Symbiochloris reticulata Switzerland extracted metagenome v1.059,348,13412,701
183Symbiochloris reticulata Spain extracted metagenome v1.056,841,18112,144
184Symbiochloris reticulata Africa extracted metagenome v1.058,569,71912,720
185Porphyra umbilicalis isolate 408629187,888,98113,567Brawley SH et al., 2017
186Nannochloropsis gaditana B-3127,589,34210,929Corteggiani Carpinelli E et al., 2014
187Blastocystis hominis Singapore isolate B (sub-type 7)18,817,2456,020Denoeud F et al., 2011
188Saprolegnia parasitica CBS 223.6553,093,24820,113Jiang RH et al., 2013
189Ectocarpus siliculosus Ec 32195,810,61916,271Cock JM et al., 2010
190Phytophthora infestans T30-4228,543,50517,797Haas BJ et al., 2009
191Thalassiosira oceanica CCMP100592,185,63734,642Lommer M et al., 2012
192Auxenochlorella protothecoides 071022,924,6377,013Gao C et al., 2014
193Sorghum bicolor738,540,93235,899Paterson AH et al., 2009
194Ostreococcus tauri RCC4221 v3.012,916,8587,669Blanc-Mathieu R et al., 2014
195Ostreococcus tauri RCC1115 v1.014,904,5438,218Blanc-Mathieu R et al., 2017
196Cryptophyceae sp. CCMP2293 v1.0534,466,77333,051Dorrell RG et al., 2023
197Pavlovales sp. CCMP2436 v1.0165,407,58626,034Dorrell RG et al., 2023
198Pelagophyceae sp. CCMP2097 v1.085,824,45319,402Dorrell RG et al., 2023
199Ochromonadaceae sp. CCMP2298 v1.061,140,75220,195Dorrell RG et al., 2023
200Symbiochloris reticulata Spain reference genome v1.058,316,28212,582
201Micromonas commoda NOUM17 (RCC 299)20,989,32610,262Worden AZ et al., 2009
202Micromonas pusilla CCMP154521,945,5459,829Worden AZ et al., 2009
203Asterochloris glomerata Cgr/DA1pho v2.055,816,16010,025Armaleo D et al., 2019
204Emiliania huxleyi CCMP1516 v1.0167,727,05533,341Read BA et al., 2013
205Naegleria gruberi v1.040,964,08515,763Fritz-Laylin LK et al., 2010
206Phytophthora sojae v3.082,601,61826,584Tyler BM et al., 2006
207Phytophthora ramorum v1.166,652,40115,743Tyler BM et al., 2006
208Phaeodactylum tricornutum1,311,968377Bowler C et al., 2008
209Aureococcus anophagefferens clone 1984 v1.056,660,57811,501Gobler CJ et al., 2011
210Chlorella variabilis NC64A v1.046,159,5159,791Blanc G et al., 2010
211Selaginella moellendorffii v1.022,285Banks JA et al., 2011
212Ostreococcus sp. RCC80913,296,2923,174
213Ostreococcus lucimarinus13,204,888Palenik B et al., 2007
214Physcomitrium patens v1.1479,985,34735,938Rensing SA et al., 2008
215Arabidopsis lyrata206,667,935Hu TT et al., 2011
216Schizochytrium aggregatum ATCC 28209 v1.040,854,26010,612
217Aplanochytrium kerguelense PBS07 v1.035,774,16111,892
218Phytophthora cinnamomi var cinnamomi v1.077,967,40226,131
219Aurantiochytrium limacinum ATCC MYA-1381 v1.060,926,26714,859
220Pseudo-nitzschia multiseries CLN-47218,730,80119,703
221Bigelowiella natans CCMP2755 v1.094,701,16321,708Curtis BA et al., 2012
222Guillardia theta CCMP2712 v1.087,159,91524,840Curtis BA et al., 2012
223Phytophthora capsici LT1534 v11.064,023,74819,805Lamour KH et al., 2012
224Fragilariopsis cylindrus CCMP 110280,540,40721,066Mock T et al., 2017
225Thalassiosira pseudonana CCMP 13351,135,583386Bowler C et al., 2008
226Phaeodactylum tricornutum CCAP 1055/1 v2.026,138,75610,025Bowler C et al., 2008
227Thalassiosira pseudonana CCMP 1335 v3.031,301,78211,390Armbrust EV et al., 2004
228Chrysochromulina parva Lackey65,764,75024,838Hovde Blake T. et al., 2019
229Diacronema lutheri NIVA-4/9243,502,67113,777Hulatt CJ et al., 2021
230Saccharina japonica str. Ja548,536,07318,732Ye N et al., 2015
231Gracilariopsis chorda SKKU-201592,180,0388,855Lee J et al., 2018
232Gonium pectorale NIES-2863148,806,07316,290Hanschen ER et al., 2016
233Monoraphidium neglectum SAG 48.8769,711,82916,755Bogen C et al., 2013
234Zygnema circumcarinatum SAG 698-1b70,999,79210,678Feng X et al., 2024
235Bathycoccus prasinos RCC110515,074,3207,900Moreau H et al., 2012
236Ulva mutabilis Foyn98,484,68911,066De Clerck O et al., 2018
237Dunaliella salina CCAP19/18343,704,39218,801Polle Juergen E. W. et al., 2017
238Populus trichocarpa v1.1485,510,91145,555Tuskan GA et al., 2006