Phycocosm Portals

116	Name	Assembly Length	# of Genes	Publication
1	Cladosiphon okamuranus S strain	169,730,755	14,750	Nishitsuji K et al., 2016
2	Galdieria sulphuraria MS1	14,906,717	7,441	Rossoni AW et al., 2019
3	Galdieria sulphuraria YNP5578.1	14,439,647	6,118	Rossoni AW et al., 2019
4	Galdieria sulphuraria Azora	14,055,766	6,305	Rossoni AW et al., 2019
5	Galdieria sulphuraria MtSh	14,998,623	6,160	Rossoni AW et al., 2019
6	Galdieria sulphuraria 5572	14,288,869	6,472	Rossoni AW et al., 2019
7	Galdieria sulphuraria 002	14,106,382	5,912	Rossoni AW et al., 2019
8	Galdieria sulphuraria SAG 21.92	14,317,600	5,956	Rossoni AW et al., 2019
9	Cyanidioschyzon merolae Soos	12,336,830	4,406	Rossoni AW et al., 2019
10	Galdieria sulphuraria RT22	15,626,563	6,982	Rossoni AW et al., 2019
11	Galdieria phelgrea Soos	14,871,243	6,125	Rossoni AW et al., 2019
12	Chlorella sorokiniana str. 1228	61,391,260	12,169
13	Chlorella sorokiniana UTEX 1602	59,371,605	10,384	Arriola MB et al., 2018
14	Botryococcus braunii Showa v2.1	170,200,492	23,685	Browne DR et al., 2017
15	Trebouxia sp. A1-2	52,896,788	13,918	Greshake Tzovaras B et al., 2020
16	Chlorella sorokiniana DOE1412	57,881,618	12,611
17	Picochlorum renovo	14,391,424	9,010	Dahlin LR et al., N/D
18	Chlorella sp. A99	40,934,037	8,298	Hamada M et al., 2018
19	Auxenochlorella protothecoides UTEX 25	21,217,637	6,041
20	Tetrabaena socialis NIES-571	135,779,852	14,296	Featherston J et al., 2018
21	Chlamydomonas eustigma NIES-2499	66,605,202	14,061	Hirooka S et al., 2017
22	Chlorella sorokiniana UTEX 1230	58,534,920	12,871
23	Picochlorum soloecismus DOE101	15,252,578	6,861	Gonzalez-Esquer CR et al., 2018
24	Mesostigma viride NIES-296	441,698,809	29,795	Liang Z et al., 2020
25	Cyanophora paradoxa CCMP329	98,351,904	25,518	Price DC et al., 2019
26	Mesostigma viride CCAC 1140	281,412,241	9,300	Wang S et al., 2020
27	Chlorokybus atmophyticus CCAC 0220	74,335,726	9,300	Wang S et al., 2020
28	Prasinoderma coloniale CCMP1413	25,323,194	7,139	Li L et al., 2020
29	Mesotaenium endlicherianum SAG 12.97	173,768,482	11,080	Cheng S et al., 2019
30	Tetraselmis striata	232,085,675	46,696	Steadman Tyler CR et al., 2019
31	Chara braunii S276	1,750,992,823	35,672	Nishiyama T et al., 2018
32	Ulva mutabilis Føyn	98,484,689	12,920	De Clerck O et al., 2018
33	Micractinium conductrix SAG 241.80	60,773,875	10,070	Arriola MB et al., 2018
34	Vitrella brassicaformis CCMP3155	72,700,666	21,239	Woo YH et al., 2015
35	Minidiscus variabilis CCMP495 v1.0	76,188,022	25,179
36	Ochromonas sp. CCMP1393 v1.4	56,491,843	19,714
37	Paraphysomonas imperforata CCMP1604 v1.4	67,191,102	17,134
38	Scenedesmus sp. NREL 46B-D3 v1.0	151,896,789	17,399
39	Scenedesmus obliquus UTEX B 3031	210,263,644	22,378
40	Chloropicon primus CCMP1205	17,400,691	8,327	Lemieux C et al., 2019
41	Caulerpa lentillifera	28,654,260	8,818	Arimoto A et al., 2019
42	Volvox carteri v2.1	131,163,211	13,076	Prochnik SE et al., 2010
43	Chlamydomonas reinhardtii v5.6	111,100,715	16,403	Merchant SS et al., 2007
44	Scenedesmus obliquus UTEX 393	107,715,903	16,779	Carreres BM et al., 2017
45	Scenedesmus obliquus EN0004 v1.0	100,077,845	15,053
46	Raphidocelis subcapitata NIES-35	51,162,697	13,383	Suzuki S et al., 2018
47	Reticulomyxa filosa	101,867,045	39,963	Glöckner G et al., 2014
48	Tetrahymena thermophila SB210	103,014,375	26,994	Eisen JA et al., 2006
49	Toxoplasma gondii ME49	65,668,120	8,318	Kissinger JC et al., 2003
50	Plasmodium falciparum 3D7	23,326,872	5,392	Gardner MJ et al., 2002
51	Paramecium tetraurelia d4_2	72,094,543	39,580	Aury JM et al., 2006
52	Oxytricha trifallax JRB310	67,158,112	24,578	Swart EC et al., N/D
53	Trichomonas vaginalis G3	176,420,065	59,679	Carlton JM et al., 2007
54	Trypanosoma brucei brucei TREU927	26,075,494	8,787	Berriman M et al., 2005
55	Giardia intestinalis ATCC 50803	11,213,615	6,502	Morrison HG et al., 2007
56	Phaeocystis globosa Pg-G v2.3	155,849,266	30,220
57	Phaeocystis antarctica CCMP1374 v2.2	198,936,094	37,754
58	Chromochloris zofingiensis SAG 211-14	60,130,699	15,274	Roth MS et al., 2017
59	Cyanidioschyzon merolae strain 10D	16,546,747	4,803	Nozaki H et al., 2007
60	Chondrus crispus Stackhouse	104,980,420	9,808	Collén J et al., 2013
61	Galdieria sulphuraria 074W	13,712,004	7,174	Schönknecht G et al., 2013
62	Symbiodinium microadriaticum CCMP2467	808,226,712	43,403	Aranda M et al., 2016
63	Chrysochromulina tobin CCMP291	59,073,094	16,770	Hovde BT et al., N/D
64	Nannochloropsis oceanica CCMP1779 v2.0	36,454,932	10,641
65	Symbiochloris reticulata Africa extracted metagenome v1.0	58,569,719	12,720
66	Symbiochloris reticulata Switzerland extracted metagenome v1.0	59,348,134	12,701
67	Symbiochloris reticulata Scotland extracted metagenome v1.0	59,360,525	12,315
68	Symbiochloris reticulata Spain extracted metagenome v1.0	56,841,181	12,144
69	Porphyra umbilicalis isolate 4086291	87,888,981	13,567	Brawley SH et al., 2017
70	Nannochloropsis gaditana B-31	27,589,342	10,929	Corteggiani Carpinelli E et al., 2014
71	Phytophthora infestans T30-4	228,543,505	17,797	Haas BJ et al., 2009
72	Blastocystis hominis Singapore isolate B (sub-type 7)	18,817,245	6,020	Denoeud F et al., N/D
73	Saprolegnia parasitica CBS 223.65	53,093,248	20,113	Jiang RH et al., 2013
74	Ectocarpus siliculosus Ec 32	195,810,619	16,271	Cock JM et al., 2010
75	Thalassiosira oceanica CCMP1005	92,185,637	34,642	Lommer M et al., 2012
76	Auxenochlorella protothecoides 0710	22,924,637	7,013	Gao C et al., 2014
77	Sorghum bicolor	738,540,932	35,899	Paterson AH et al., 2009
78	Ostreococcus tauri RCC4221 v3.0	12,916,858	7,669	Blanc-Mathieu R et al., 2014
79	Ostreococcus tauri RCC1115 v1.0	14,904,543	8,218	Blanc-Mathieu R et al., 2017
80	Cryptophyceae sp. CCMP2293 v1.0	534,466,773	33,051
81	Pavlovales sp. CCMP2436 v1.0	165,407,586	26,034
82	Pelagophyceae sp. CCMP2097 v1.0	85,824,453	19,402
83	Ochromonadaceae sp. CCMP2298 v1.0	61,140,752	20,195
84	Symbiochloris reticulata Spain reference genome v1.0	58,316,282	12,582
85	Micromonas commoda NOUM17 (RCC 299)	20,989,326	10,262	Worden AZ et al., 2009
86	Micromonas pusilla CCMP1545	21,945,545	9,829	Worden AZ et al., 2009
87	Asterochloris glomerata Cgr/DA1pho v2.0	55,816,160	10,025	Armaleo D et al., 2019
88	Emiliania huxleyi CCMP1516 v1.0	167,727,055	33,341	Read BA et al., 2013
89	Phytophthora ramorum v1.1	66,652,401	15,743	Tyler BM et al., 2006
90	Phytophthora sojae v3.0	82,601,618	26,584	Tyler BM et al., 2006
91	Aureococcus anophagefferens clone 1984	56,660,578	11,501	Gobler CJ et al., 2011
92	Naegleria gruberi v1.0	40,964,085	15,763	Fritz-Laylin LK et al., 2010
93	Chlorella variabilis NC64A	46,159,515	9,791	Blanc G et al., 2010
94	Selaginella moellendorffii v1.0		22,285	Banks JA et al., 2011
95	Ostreococcus lucimarinus	13,204,888		Palenik B et al., 2007
96	Ostreococcus sp. RCC809	13,296,292	3,174
97	Physcomitrella patens subsp patens v1.1	479,985,347	35,938	Rensing SA et al., 2008
98	Arabidopsis lyrata	206,667,935		Hu TT et al., 2011
99	Schizochytrium aggregatum ATCC 28209	40,854,260	10,612
100	Aplanochytrium kerguelense PBS07 v1.0	35,774,161	11,892
101	Aurantiochytrium limacinum ATCC MYA-1381	60,926,267	14,859
102	Phytophthora cinnamomi var cinnamomi v1.0	77,967,402	26,131
103	Pseudo-nitzschia multiseries CLN-47	218,730,801	19,703
104	Guillardia theta CCMP2712	87,159,915	24,840	Curtis BA et al., 2012
105	Bigelowiella natans CCMP2755	94,701,163	21,708	Curtis BA et al., 2012
106	Phytophthora capsici LT1534 v11.0	64,023,748	19,805	Lamour KH et al., 2012
107	Coccomyxa subellipsoidea C-169	48,952,548	9,851	Blanc G et al., 2012
108	Fragilariopsis cylindrus CCMP 1102	80,540,407	21,066	Mock T et al., 2017
109	Thalassiosira pseudonana CCMP 1335	31,301,782	11,390	Armbrust EV et al., 2004
110	Phaeodactylum tricornutum CCAP 1055/1 v2.0	26,138,756	10,025	Bowler C et al., 2008
111	Klebsormidium nitens NIES-2285	103,921,766	16,132	Hori K et al., 2014
112	Monoraphidium neglectum SAG 48.87	69,711,829	16,755	Bogen C et al., 2013
113	Bathycoccus prasinos RCC1105	15,074,320	7,900	Moreau H et al., 2012
114	Gonium pectorale NIES-2863	148,806,073	16,290	Hanschen ER et al., 2016
115	Dunaliella salina CCAP19/18	343,704,392	18,801	Polle JEW et al., 2017
116	Populus trichocarpa v1.1	485,510,911	45,555	Tuskan GA et al., 2006